Database Commons a catalog of biological databases

Database Commons - Browse
Data type:

Database name Data type(s) Major organism(s) Location Citation* Status z-index
COXPRESdb - Coexpression Database Japan 230alive23.00
lncRNAdb Australia 351alive49.64
InParanoid - ortholog groups with inparalogs Sweden 1253alive95.42
AHTPDB - Database of Antihypertensive Peptides India 7alive2.33
NONCODE - Noncoding RNAs China 637unstable43.61
TFBSshape - DNA shape features of transcription factor binding sites United States 39alive9.75
GEISHA - Gallus Expression In Situ Hybridization Analysis United States 113alive7.83
ChIPBase China 199unstable23.48
QTLdb - Animal QTL database United States 143unstable20.59
H2DB - Heritability Database Annotating with Trait-Associated Genomic Loci Japan 1alive0.20
Pigment_Cell United States 3unstable0.16
APADB Germany 8alive1.98
EpimiR - Database of Curated Mutual Regulation Between epigenetic Modifications and miRNAs China 8unstable1.42
miRIAD - Intragenic MicroRNA Database Germany 4unstable0.52
C-It Germany 11alive1.35
MPID-T2 - MHC-Peptide Interaction Database-TR version 2 Australia 8unstable0.67
DetoxiProt - An integrated database of detoxification proteins China 3unstable0.33
ECgene - ECgene Korea Rep. 167unstable7.84
PolyA_DB United States 83alive6.38
GeneNet - The GeneNet system Russian Federation 68alive5.18
ChickVD - Chicken Variation Database China 46alive3.50
GALA - Genome ALignments and Annotations United States 84alive5.60
deepBase - deepBase China 102unstable4.08
Transterm New Zealand 108alive6.48
ABS - database of Annotated regulatory Binding Sites from orthologous promoters Spain 68alive5.67
DBD - Transcription factor prediction database United Kingdom 156unstable11.96
ExDom - ExDom United States 10unstable0.29
TranspoGene - TranspoGene Israel 56alive5.54
Gallus GBrowse - A Unified Genomic Database for the Chicken United States 14dead0.03
OPTIC - Orthologous and Paralogous Transcripts in Clades United Kingdom 32alive3.07
Greglist - Database of G-quadruplex Regulated Genes China 43unstable2.88
AnimalQTLdb - Animal Quantitative Trait Loci (QTL) database United States 338unstable22.43
GenBank - GenBank United States 46415unstable604.80
piRNA cluster db - piRNA cluster database Germany 29alive4.74
MouseNet - Probabilistic Functional Gene Network for Laboratory Mouse,Mus Musculus Korea Rep. 0alive0.00
BIG Data Center - BIG Data Center for Life & Health Sciences China 12alive12.00
R-loopDB Singapore 0alive0.00
* Citations derived from Google Scholar.