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Database Commons - FESD

FESD

Citations: 35

z-index 0.00

Short name FESD
Full name Functional Element SNPs Database
Description Functional Element SNPs Database (FESD) categorizes functional elements in human genic regions and provides a set of single nucleotide polymorphisms (SNPs) located within each area.
URL http://combio.kribb.re.kr/ksnp/resd/
Year founded 2004
Last update & version     
Availability Not Available
University/Institution hosted National Genome Information Center
Address 52 Eoeun-dong, Yuseong-gu, Daejeon 305-333, Korea
City Daejeon
Province/State
Country/Region Korea Rep.
Contact name Young Joo Kim
Contact email yjkim@kribb.re.kr
Data type(s)
Major organism(s)
Keyword(s)
  • SNP
Publication(s)
  • FESD: a Functional Element SNPs Database in human. [PMID: 15608252]

    Hyo Jin Kang, Kyoung Oak Choi, Byung-Dong Kim, Sangsoo Kim, Young Joo Kim
    Nucleic acids research 2005:33(Database issue)
    35 Citations (Google Scholar as of 2016-02-29)

    Abstract: We have created the Functional Element SNPs Database (FESD) that categorizes functional elements in human genic regions and provides a set of single nucleotide polymorphisms (SNPs) located within each area. In the FESD, the human genic regions were divided into 10 different functional elements, such as promoter regions, CpG islands, 5'-untranslated regions (5'-UTRs), translation start sites, splice sites, coding exons, introns, translation stop sites, polyadenylation signals and 3'-UTRs, and subsequently, all the known SNPs were assigned to each functional element at their respective position. With the FESD web interface, users can select a set of SNPs in the specific functional elements and get their flanking sequences for genotyping experiments, which will help in finding mutations that contribute to the common and polygenic diseases. A web interface for the FESD is freely available at http://combio.kribb.re.kr/ksnp/resd/.

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Tags

DNA
Homo sapiens
SNP

Record metadata

  • Created on: 2015-07-14
  • Curated by:
    • Lina Ma [2016-06-03]
    • Jian Sang [2016-04-03]
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