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Database Commons - 5'SAGE

5'SAGE

Citations: 17

z-index 0.00

Short name 5'SAGE
Full name 5'-end Serial Analysis of Gene Expression database
Description The 5′SAGE database displays the observed frequencies of individual 5′ end SAGE tags and previously unknown transcription start sites in the promoter regions, introns and intergenic regions of known genes.
URL http://5sage.gi.k.u-tokyo.ac.jp/
Year founded 2004
Last update & version     
Availability Not Available
University/Institution hosted The University of Tokyo
Address 5-1-5 Kashinoha, Kashiwa City, Chiba 277-8562, Japan
City Tokyo
Province/State
Country/Region Japan
Contact name Shinichi Morishita
Contact email moris@k.u-tokyo.ac.jp
Data type(s)
Major organism(s)
Keyword(s)
  • 5′SAGE
  • transcription start site
Publication(s)
  • 5'SAGE: 5'-end Serial Analysis of Gene Expression database. [PMID: 15608259]

    Yasuhiro Kasai, Shin-ichi Hashimoto, Tomoyuki Yamada, Jun Sese, Sumio Sugano, Kouji Matsushima, Shinichi Morishita
    Nucleic acids research 2005:33(Database issue)
    17 Citations (Google Scholar as of 2016-02-29)

    Abstract: To comprehensively identify transcription start sites and the frequencies of individual mRNAs in human cell libraries, a method of 5' end Serial Analysis of Gene Expression (SAGE) was developed recently, which makes it possible to collect a large amount of start site information, and subsequently, we have established a related database server called 5'SAGE. This database displays the observed frequencies of individual 5' end SAGE tags and previously unknown transcription start sites in the promoter regions, introns and intergenic regions of known genes. 5'SAGE will be useful for analyzing promoter regions and start site variation in different tissues, and is freely available at http://5sage.gi.k.u-tokyo.ac.jp/.

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Tags

DNA
Homo sapiens
5′SAGE transcription start site

Record metadata

  • Created on: 2015-07-14
  • Curated by:
    • Mengwei Li [2015-11-21]
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