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Database Commons - H-ANGEL

H-ANGEL 1.0

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Citations: 24

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Short name H-ANGEL
Full name Human Anatomic Gene Expression Library
Description The Human Anatomic Gene Expression Library (H-ANGEL) is a resource for information concerning the anatomical distribution and expression of human gene transcripts.
URL http://www.jbirc.aist.go.jp/hinv/h-angel/
Year founded 2004
Last update & version 2016-03-20    v 1.0
Availability Not Available
University/Institution hosted Japan Biological Information Research Center
Address Japan Biological Informatics Consortium, Time24 Building 10F, 2-45 Aomi, Koto-ku, Tokyo 135-0064, Japan
City Tokyo
Province/State
Country/Region Japan
Contact name Motohiko Tanino
Contact email mtanino@jbirc.aist.go.jp
Data type(s)
Major organism(s)
Keyword(s)
  • anatomical distribution
  • web-based tool
Publication(s)
  • The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms. [PMID: 15608263]

    Motohiko Tanino, Marie-Anne Debily, Takuro Tamura, Teruyoshi Hishiki, Osamu Ogasawara, Katsuji Murakawa, Shoko Kawamoto, Kouichi Itoh, Shinya Watanabe, Sandro José de Souza, Sandrine Imbeaud, Esther Graudens, Eric Eveno, Phillip Hilton, Yukio Sudo, Janet Kelso, Kazuho Ikeo, Tadashi Imanishi, Takashi Gojobori, Charles Auffray, Winston Hide, Kousaku Okubo
    Nucleic acids research 2005:33(Database issue)
    24 Citations (Google Scholar as of 2016-02-29)

    Abstract: The Human Anatomic Gene Expression Library (H-ANGEL) is a resource for information concerning the anatomical distribution and expression of human gene transcripts. The tool contains protein expression data from multiple platforms that has been associated with both manually annotated full-length cDNAs from H-InvDB and RefSeq sequences. Of the H-Inv predicted genes, 18 897 have associated expression data generated by at least one platform. H-ANGEL utilizes categorized mRNA expression data from both publicly available and proprietary sources. It incorporates data generated by three types of methods from seven different platforms. The data are provided to the user in the form of a web-based viewer with numerous query options. H-ANGEL is updated with each new release of cDNA and genome sequence build. In future editions, we will incorporate the capability for expression data updates from existing and new platforms. H-ANGEL is accessible at http://www.jbirc.aist.go.jp/hinv/h-angel/.

Community reviews: 1.0 stars (1 reviews)

Data
quality & quantity (1.0)
Content organization & presentation (1.0)
System accessibility & reliability (1.0)
Reviewed by
yuchunlei@big.ac.cn on 19 Nov 2015

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Tags

Expression RNA
Homo sapiens
anatomical distribution web-based tool

Record metadata

  • Created on: 2015-07-14
  • Curated by:
    • Chunlei Yu [2016-04-27]
    • Chunlei Yu [2016-03-31]
    • Mengwei Li [2016-02-20]
    • Chunlei Yu [2015-11-19]
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