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Database Commons - BodyParts3D

BodyParts3D

Citations: 30

z-index 0.00

Short name BodyParts3D
Full name
Description BodyParts3D is a dictionary-type database for anatomy in which anatomical concepts are represented by 3D structure data that specify corresponding segments of a 3D whole-body model for an adult human male.
URL http://lifesciencedb.jp/ag/bp3d/
Year founded 2009
Last update & version     v1.0
Availability Free to all users
University/Institution hosted DNA Data Bank of Japan, National Institute of Genetics
Address Bunkyo-ku, Tokyo 113-0032, Japan
City Tokyo
Province/State
Country/Region Japan
Contact name Kousaku Okubo
Contact email kokubo@genes.nig.ac.jp
Data type(s)
Major organism(s)
Keyword(s)
  • anatomical structure
Publication(s)
  • BodyParts3D: 3D structure database for anatomical concepts. [PMID: 18835852]

    Nobutaka Mitsuhashi, Kaori Fujieda, Takuro Tamura, Shoko Kawamoto, Toshihisa Takagi, Kousaku Okubo
    Nucleic acids research 2009:37(Database issue)
    30 Citations (Google Scholar as of 2016-01-27)

    Abstract: BodyParts3D is a dictionary-type database for anatomy in which anatomical concepts are represented by 3D structure data that specify corresponding segments of a 3D whole-body model for an adult human male. It encompasses morphological and geometrical knowledge in anatomy and complements ontological representation. Moreover, BodyParts3D introduces a universal coordinate system in human anatomy, which may facilitate management of samples and data in biomedical research and clinical practice. As of today, 382 anatomical concepts, sufficient for mapping materials in most molecular medicine experiments, have been specified. Expansion of the dictionary by adding further segments and details to the whole-body model will continue in collaboration with clinical researchers until sufficient resolution and accuracy for most clinical application are achieved. BodyParts3D is accessible at: http://lifesciencedb.jp/ag/bp3d/.

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Tags

Structure
Homo sapiens
anatomical structure

Record metadata

  • Created on: 2015-07-27
  • Curated by:
    • Zhang Zhang [2016-04-26]
    • Mengwei Li [2016-03-31]
    • Mengwei Li [2015-11-29]
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