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Database Commons - ERGR

ERGR

Citations: 32

z-index 0.00

Short name ERGR
Full name ethanol-related gene resource
Description ERGR is a comprehensive ethanol-related gene resource which curated more than 30 large-scale data sets including linkage, association and microarray gene expression from the literature and 21 mouse QTLs from public databases.
URL http://bioinfo.vipbg.vcu.edu/ERGR/
Year founded 2009
Last update & version     v1.0
Availability Free to all users
University/Institution hosted Virginia Commonwealth University
Address Department of Psychiatry and Virginia Institute for Psychiatric and Behavioral Genetics,Virginia Commonwealth University, Richmond, VA 23298, USA
City Richmond
Province/State VA
Country/Region United States
Contact name Zhongming Zhao
Contact email zzhao@vcu.edu
Data type(s)
Major organism(s)
Keyword(s)
  • ethanol-related gene
  • QTLs
Publication(s)
  • ERGR: An ethanol-related gene resource. [PMID: 18978021]

    An-Yuan Guo, Bradley T Webb, Michael F Miles, Mark P Zimmerman, Kenneth S Kendler, Zhongming Zhao
    Nucleic acids research 2009:37(Database issue)
    32 Citations (Google Scholar as of 2016-01-27)

    Abstract: Over the last decade rapid progress has been made in the study of ethanol-related traits including alcohol abuse and dependence, and behavioral responses to ethanol in both humans and animal models. To collect, curate, integrate these results so as to make them easily accessible and interpretable for researchers, we developed ERGR, a comprehensive ethanol-related gene resource. We collected and curated more than 30 large-scale data sets including linkage, association and microarray gene expression from the literature and 21 mouse QTLs from public databases. At present, the ERGR deposits ethanol-related information of approximately 7000 genes from five organisms: human (3311), mouse (2129), rat (679), fly (614) and worm (228). ERGR provides gene annotations and orthologs, detailed gene study information (e.g. fold changes of gene expression, P-values), and both the text and BLAST searches. Moreover, ERGR has data integration tools such as for data union and intersection, and candidate gene selection based on evidence in multiple datasets or organisms. The ERGR database is evolving with new data releases. More functions will also be added. ERGR has a user-friendly web interface with browse and search functions at multiple levels. It is freely available at http://bioinfo.vipbg.vcu.edu/ERGR/.

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Tags

DNA
Caenorhabditis elegans Drosophila melanogaster Homo sapiens Mus musculus Rattus norvegicus
ethanol-related gene QTLs

Record metadata

  • Created on: 2015-07-27
  • Curated by:
    • Jian Sang [2016-04-05]
    • Jian Sang [2015-12-11]
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