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Database Commons - Sys-BodyFluid

Sys-BodyFluid

Citations: 57

z-index 1.08

Short name Sys-BodyFluid
Full name
Description Sys-BodyFluid is a systematical database for human body fluid proteome research
URL http://www.biosino.org/bodyfluid/
Year founded 2008
Last update & version 2008-01-11    v1.0
Availability Free to all users
University/Institution hosted Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences
Address Shanghai 200031, China
City Shanghai
Province/State
Country/Region China
Contact name Yi-Xue Li
Contact email yxli@sibs.ac.cn
Data type(s)
Major organism(s)
Keyword(s)
  • human body fluid proteome
Publication(s)
  • Sys-BodyFluid: a systematical database for human body fluid proteome research. [PMID: 18978022]

    Su-Jun Li, Mao Peng, Hong Li, Bo-Shu Liu, Chuan Wang, Jia-Rui Wu, Yi-Xue Li, Rong Zeng
    Nucleic acids research 2009:37(Database issue)
    57 Citations (Google Scholar as of 2016-01-28)

    Abstract: Recently, body fluids have widely become an important target for proteomic research and proteomic study has produced more and more body fluid related protein data. A database is needed to collect and analyze these proteome data. Thus, we developed this web-based body fluid proteome database Sys-BodyFluid. It contains eleven kinds of body fluid proteomes, including plasma/serum, urine, cerebrospinal fluid, saliva, bronchoalveolar lavage fluid, synovial fluid, nipple aspirate fluid, tear fluid, seminal fluid, human milk and amniotic fluid. Over 10,000 proteins are presented in the Sys-BodyFluid. Sys-BodyFluid provides the detailed protein annotations, including protein description, Gene Ontology, domain information, protein sequence and involved pathways. These proteome data can be retrieved by using protein name, protein accession number and sequence similarity. In addition, users can query between these different body fluids to get the different proteins identification information. Sys-BodyFluid database can facilitate the body fluid proteomics and disease proteomics research as a reference database. It is available at http://www.biosino.org/bodyfluid/.

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Tags

Protein
Homo sapiens
human body fluid proteome

Record metadata

  • Created on: 2015-07-27
  • Curated by:
    • Lin Xia [2016-03-28]
    • Mengwei Li [2016-02-20]
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