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Database Commons - MycoCosm

MycoCosm

Citations: 93

z-index 14.88

Short name MycoCosm
Full name The fungal genomics resource
Description Analysis and dissemination of fungal genome sequences and other 'omics' data by providing interactive web-based tools
URL http://genome.jgi.doe.gov/programs/fungi/index.jsf
Year founded 2013
Last update & version 2015-06-02    v1.0
Availability Free to all users
University/Institution hosted US Department of Energy Joint Genome Institute
Address 2800 Mitchell Drive,Walnut Creek,CA 94598,USA
City Walnut Creek
Province/State CA
Country/Region United States
Contact name Igor V. Grigoriev
Contact email ivgrigoriev@lbl.gov
Data type(s)
Major organism(s)
Keyword(s)
  • genome sequence
  • omics data
Publication(s)
  • MycoCosm portal: gearing up for 1000 fungal genomes. [PMID: 24297253]

    Igor V Grigoriev, Roman Nikitin, Sajeet Haridas, Alan Kuo, Robin Ohm, Robert Otillar, Robert Riley, Asaf Salamov, Xueling Zhao, Frank Korzeniewski, Tatyana Smirnova, Henrik Nordberg, Inna Dubchak, Igor Shabalov
    Nucleic acids research 2014:42(Database issue)
    93 Citations (Google Scholar as of 2016-01-30)

    Abstract: MycoCosm is a fungal genomics portal (http://jgi.doe.gov/fungi), developed by the US Department of Energy Joint Genome Institute to support integration, analysis and dissemination of fungal genome sequences and other 'omics' data by providing interactive web-based tools. MycoCosm also promotes and facilitates user community participation through the nomination of new species of fungi for sequencing, and the annotation and analysis of resulting data. By efficiently filling gaps in the Fungal Tree of Life, MycoCosm will help address important problems associated with energy and the environment, taking advantage of growing fungal genomics resources.

Community reviews

Data
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Reviewed by

Word cloud (embeddable)

Database Commons - Word Cloud

Accessibility

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200 OK2016-04-15
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200 OK2016-03-21
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200 OK2016-03-14
200 OK2016-03-11
200 OK2016-03-09
200 OK2016-03-07
200 OK2016-03-04
200 OK2016-03-02
200 OK2016-02-29
200 OK2016-02-26
200 OK2016-02-24
200 OK2016-02-22
200 OK2016-02-19
200 OK2016-02-17
200 OK2016-02-15
200 OK2016-02-14
200 OK2016-02-12
200 OK2016-02-10
200 OK2016-02-08
200 OK2016-02-07
200 OK2016-02-05
200 OK2016-02-03
200 OK2016-02-01
200 OK2016-01-31
200 OK2016-01-29
200 OK2016-01-27
200 OK2016-01-25
200 OK2016-01-24
200 OK2016-01-22
200 OK2016-01-20
200 OK2016-01-18
200 OK2016-01-17
200 OK2016-01-15
200 OK2016-01-13
200 OK2016-01-11
200 OK2016-01-10
200 OK2016-01-08
200 OK2016-01-06
200 OK2016-01-04

Tags

DNA Expression Protein RNA
Fungus
genome sequence omics data

Record metadata

  • Created on: 2015-06-20
  • Curated by:
    • Lin Liu [2016-03-27]
    • Li Yang [2015-06-26]
Stats