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Database Commons - LncRNA2Target

LncRNA2Target

Citations: 12

z-index 1.12

Short name LncRNA2Target
Full name LncRNA-target association database
Description LncRNA2Target is a database for differentially expressed genes after lncRNA knockdown or overexpression.
URL http://www.lncrna2target.org/
Year founded 2014
Last update & version 2014-08-02    v1.2
Availability Free to all users
University/Institution hosted Harbin Institute of Technology
Address Harbin,Heilongjiang 150001,China
City Harbin
Province/State Heilongjiang
Country/Region China
Contact name Yadong Wang
Contact email ydwang@hit.edu.cn
Data type(s)
Major organism(s)
Keyword(s)
  • lncRNA target
  • manually curated database
Publication(s)
  • LncRNA2Target: a database for differentially expressed genes after lncRNA knockdown or overexpression. [PMID: 25399422]

    Qinghua Jiang, Jixuan Wang, Xiaoliang Wu, Rui Ma, Tianjiao Zhang, Shuilin Jin, Zhijie Han, Renjie Tan, Jiajie Peng, Guiyou Liu, Yu Li, Yadong Wang
    Nucleic acids research 2015:43(Database issue)
    12 Citations (Google Scholar as of 2015-12-27)

    Abstract: Long non-coding RNAs (lncRNAs) have emerged as critical regulators of genes at epigenetic, transcriptional and post-transcriptional levels, yet what genes are regulated by a specific lncRNA remains to be characterized. To assess the effects of the lncRNA on gene expression, an increasing number of researchers profiled the genome-wide or individual gene expression level change after knocking down or overexpressing the lncRNA. Herein, we describe a curated database named LncRNA2Target, which stores lncRNA-to-target genes and is publicly accessible at http://www.lncrna2target.org. A gene was considered as a target of a lncRNA if it is differentially expressed after the lncRNA knockdown or overexpression. LncRNA2Target provides a web interface through which its users can search for the targets of a particular lncRNA or for the lncRNAs that target a particular gene. Both search types are performed either by browsing a provided catalog of lncRNA names or by inserting lncRNA/target gene IDs/names in a search box. © The Author(s) 2014. Published by Oxford University Press on behalf of Nucleic Acids Research.

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Tags

Expression RNA
Homo sapiens Mus musculus
lncRNA target manually curated database

Record metadata

  • Created on: 2015-06-20
  • Curated by:
    • Chunlei Yu [2016-04-17]
    • Chunlei Yu [2016-04-01]
    • Mengwei Li [2016-02-18]
    • Lina Ma [2015-11-18]
    • Chunlei Yu [2015-06-29]
Stats