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Database Commons - BioAssay

BioAssay

Citations: 84

z-index 7.35

Short name BioAssay
Full name
Description BioAssay is a public repository for archiving biological tests of small molecules generated through high-throughput screening experiments,medicinal chemistry studies,chemical biology research and drug discovery programs.
URL http://pubchem.ncbi.nlm.nih.gov/
Year founded
Last update & version NA    v1.0
Availability Free to all users
University/Institution hosted National Center for Biotechnology Information
Address Bethesda, MD 20894, USA
City Bethesda
Province/State MD
Country/Region United States
Contact name Yanli Wang
Contact email ywang@ncbi.nlm.nih.gov
Data type(s)
Major organism(s)
Keyword(s)
  • small molecule
Publication(s)
  • PubChem BioAssay: 2014 update. [PMID: 24198245]

    Yanli Wang, Tugba Suzek, Jian Zhang, Jiyao Wang, Siqian He, Tiejun Cheng, Benjamin A Shoemaker, Asta Gindulyte, Stephen H Bryant
    Nucleic acids research 2014:42(Database issue)
    84 Citations (Google Scholar as of 2016-04-28)

    Abstract: PubChem's BioAssay database (http://pubchem.ncbi.nlm.nih.gov) is a public repository for archiving biological tests of small molecules generated through high-throughput screening experiments, medicinal chemistry studies, chemical biology research and drug discovery programs. In addition, the BioAssay database contains data from high-throughput RNA interference screening aimed at identifying critical genes responsible for a biological process or disease condition. The mission of PubChem is to serve the community by providing free and easy access to all deposited data. To this end, PubChem BioAssay is integrated into the National Center for Biotechnology Information retrieval system, making them searchable by Entrez queries and cross-linked to other biomedical information archived at National Center for Biotechnology Information. Moreover, PubChem BioAssay provides web-based and programmatic tools allowing users to search, access and analyze bioassay test results and metadata. In this work, we provide an update for the PubChem BioAssay resource, such as information content growth, new developments supporting data integration and search, and the recently deployed PubChem Upload to streamline chemical structure and bioassay submissions.

Community reviews

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Tags

Drug and Chemical Compound
small molecule

Record metadata

  • Created on: 2015-06-20
  • Curated by:
    • Mengwei Li [2016-04-12]
    • Mengwei Li [2016-03-31]
    • Mengwei Li [2015-06-26]
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