Database Commons a catalog of biological databases

Database Commons - Polbase

Polbase

Citations: 8

z-index 0.25

Short name Polbase
Full name Polymerase Database
Description Polbase is a repository of biochemical, genetic, and structural information about DNA Polymerases.
URL https://polbase.neb.com/
Year founded 2011
Last update & version 2015-08-12    v1.0
Availability Free to all users
University/Institution hosted New England Biolabs
Address 240 County Road, Ipswich, Massachusetts, USA
City Ipswich
Province/State Massachusetts
Country/Region United States
Contact name Nicole M. Nichols
Contact email nichols@neb.com
Data type(s)
Major organism(s)
Keyword(s)
  • DNA polymerases
Publication(s)
  • Polbase: a repository of biochemical, genetic and structural information about DNA polymerases. [PMID: 21993301]

    Bradley W Langhorst, William E Jack, Linda Reha-Krantz, Nicole M Nichols
    Nucleic acids research 2012:40(Database issue)
    8 Citations (Google Scholar as of 2016-05-01)

    Abstract: Polbase (http://polbase.neb.com) is a freely accessible database of DNA polymerases and related references. It has been developed in a collaborative model with experts whose contributions reflect their varied backgrounds in genetics, structural biology and biochemistry. Polbase is designed to compile detailed results of polymerase experimentation, presenting them in a dynamic view to inform further research. After validation, results from references are displayed in context with relevant experimental details and are always traceable to their source publication. Polbase is connected to other resources, including PubMed, UniProt and the RCSB Protein Data Bank, to provide multi-faceted views of polymerase knowledge. In addition to a simple web interface, Polbase data is exposed for custom analysis by external software. With the contributions of many polymerase investigators, Polbase has become a powerful research tool covering most important aspects of polymerases, from sequence and structure to biochemistry.

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Tags

DNA Structure
Eukaryota Prokaryote
DNA polymerases

Record metadata

  • Created on: 2015-06-20
  • Curated by:
    • Shixiang Sun [2016-03-25]
    • Shixiang Sun [2015-11-21]
    • Shixiang Sun [2015-06-26]
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