Database Commons a catalog of biological databases

Database Commons - CADRE

CADRE

Citations: 92

z-index 4.80

Short name CADRE
Full name Central Aspergillus Resource
Description The Central Aspergillus Data REpository is a public resource for genomic data extracted from species of Aspergillus.
URL http://www.cadre-genomes.org.uk/index.html
Year founded 2003
Last update & version 2011-1    v3.0
Availability Free to all users
University/Institution hosted University of Manchester
Address Manchester M23 9LT, UK
City Manchester
Province/State
Country/Region United Kingdom
Contact name Jane Mabey Gilsenan
Contact email jane.gilsenan@manchester.ac.uk
Data type(s)
Major organism(s)
Keyword(s)
  • genome
Publication(s)
  • CADRE: the Central Aspergillus Data REpository 2012. [PMID: 22080563]

    Jane Mabey Gilsenan, John Cooley, Paul Bowyer
    Nucleic acids research 2012:40(Database issue)
    26 Citations (Google Scholar as of 2016-01-14)

    Abstract: The Central Aspergillus Data REpository (CADRE; http://www.cadre-genomes.org.uk) is a public resource for genomic data extracted from species of Aspergillus. It provides an array of online tools for searching and visualising features of this significant fungal genus. CADRE arose from a need within the medical community to understand the human pathogen Aspergillus fumigatus. Due to the paucity of Aspergillus genomic resources 10 years ago, the long-term goal of this project was to collate and maintain Aspergillus genomes as they became available. Since our first release in 2004, the resource has expanded to encompass annotated sequence for eight other Aspergilli and provides much needed support to the international Aspergillus research community. Recent developments, however, in sequencing technology are creating a vast amount of genomic data and, as a result, we shortly expect a tidal wave of Aspergillus data. In preparation for this, we have upgraded the database and software suite. This not only enables better management of more complex data sets, but also improves annotation by providing access to genome comparison data and the integration of high-throughput data.

  • CADRE: the Central Aspergillus Data REpository. [PMID: 14681443]

    J E Mabey, M J Anderson, P F Giles, C J Miller, T K Attwood, N W Paton, E Bornberg-Bauer, G D Robson, S G Oliver, D W Denning
    Nucleic acids research 2004:32(Database issue)
    66 Citations (Google Scholar as of 2016-01-14)

    Abstract: CADRE is a public resource for housing and analysing genomic data extracted from species of Aspergillus. It arose to enable maintenance of the complete annotated genomic sequence of Aspergillus fumigatus and to provide tools for searching, analysing and visualizing features of fungal genomes. By implementing CADRE using Ensembl, a framework is in place for storing and comparing several genomes: the resource will thus expand by including other Aspergillus genomes (such as Aspergillus nidulans) as they become available. CADRE is accessible at http://www.cadre. man.ac.uk.

Community reviews

Data
quality & quantity
Content organization & presentation
System accessibility & reliability
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Word cloud (embeddable)

Database Commons - Word Cloud

Accessibility

Rate of accessibility:
HTTP status codeDate requested
404 Failed2018-11-20
404 Failed2018-11-16
404 Failed2018-11-13
-1 Failed2018-11-09
404 Failed2018-11-06
404 Failed2018-11-02
404 Failed2018-10-30
404 Failed2018-10-26
404 Failed2018-10-23
404 Failed2018-10-19
404 Failed2018-10-16
404 Failed2018-10-12
404 Failed2018-10-09
404 Failed2018-10-05
404 Failed2018-10-02
404 Failed2018-09-28
404 Failed2018-09-25
404 Failed2018-09-21
404 Failed2018-09-18
404 Failed2018-09-14
404 Failed2018-09-11
404 Failed2018-09-07
404 Failed2018-09-04
404 Failed2018-08-31
404 Failed2018-08-28
404 Failed2018-08-24
404 Failed2018-08-21
404 Failed2018-08-17
404 Failed2018-08-14
404 Failed2018-08-10
404 Failed2018-08-07
404 Failed2018-08-03
404 Failed2018-07-31
404 Failed2018-07-27
404 Failed2018-07-24
200 OK2018-07-20
200 OK2018-07-17
200 OK2018-07-13
200 OK2018-07-10
200 OK2018-07-06
200 OK2018-07-03
200 OK2018-06-29
200 OK2018-06-26
200 OK2018-06-22
200 OK2018-06-19
200 OK2018-06-15
200 OK2018-06-12
200 OK2018-06-08
200 OK2018-06-05
200 OK2018-06-01
200 OK2018-05-29
200 OK2018-05-25
200 OK2018-05-22
200 OK2018-05-18
200 OK2018-05-15
200 OK2018-05-11
200 OK2018-05-08
200 OK2018-05-04
200 OK2018-05-01
200 OK2018-04-27
200 OK2018-04-24
200 OK2018-04-20
200 OK2018-04-17
200 OK2018-04-13
200 OK2018-04-10
200 OK2018-04-06
200 OK2018-04-03
404 Failed2018-02-27
404 Failed2018-02-23
403 Failed2018-02-20
403 Failed2018-02-16
403 Failed2018-02-13
403 Failed2018-02-09
403 Failed2018-02-06
403 Failed2018-02-02
403 Failed2018-01-30
403 Failed2018-01-26
403 Failed2018-01-23
403 Failed2018-01-19
403 Failed2018-01-16
403 Failed2018-01-12
403 Failed2018-01-09
-1 Failed2018-01-05
-1 Failed2018-01-02
-1 Failed2017-12-29
-1 Failed2017-12-26
-1 Failed2017-12-22
-1 Failed2017-12-19
-1 Failed2017-12-15
-1 Failed2017-12-12
-1 Failed2017-12-08
-1 Failed2017-12-05
-1 Failed2017-12-01
-1 Failed2017-11-28
-1 Failed2017-11-24
-1 Failed2017-11-21
-1 Failed2017-11-17
-1 Failed2017-11-14
-1 Failed2017-11-10
-1 Failed2017-11-07
-1 Failed2017-11-03
-1 Failed2017-10-31
-1 Failed2017-10-27
-1 Failed2017-10-24
-1 Failed2017-10-20
-1 Failed2017-10-17
-1 Failed2017-10-13
-1 Failed2017-10-10
200 OK2017-10-06
200 OK2017-10-03
200 OK2017-09-29
-1 Failed2017-09-26
200 OK2017-09-22
200 OK2017-09-19
200 OK2017-09-15
200 OK2017-09-12
200 OK2017-09-08
200 OK2017-09-05
200 OK2017-09-01
200 OK2017-08-29
200 OK2017-08-25
200 OK2017-08-22
200 OK2017-08-18
200 OK2017-08-15
200 OK2017-08-11
200 OK2017-08-08
200 OK2017-08-04
200 OK2017-08-01
200 OK2017-07-28
200 OK2017-07-25
200 OK2017-07-21
200 OK2017-07-18
200 OK2017-07-14
200 OK2017-07-04
200 OK2017-06-30
200 OK2017-06-27
200 OK2017-06-23
200 OK2017-06-20
200 OK2017-06-16
200 OK2017-06-13
200 OK2017-06-09
200 OK2017-06-06
200 OK2017-06-02
200 OK2017-05-30
200 OK2017-05-26
200 OK2017-05-23
200 OK2017-05-19
200 OK2017-05-16
200 OK2017-05-12
200 OK2017-05-09
200 OK2017-05-05
200 OK2017-05-02
200 OK2017-04-28
200 OK2017-04-25
200 OK2017-04-21
200 OK2017-04-18
200 OK2017-04-14
200 OK2017-04-11
200 OK2017-04-07
200 OK2017-04-04
200 OK2017-03-31
200 OK2017-03-28
200 OK2017-03-24
200 OK2017-03-21
200 OK2017-03-17
200 OK2017-03-14
200 OK2017-03-10
200 OK2017-03-07
200 OK2017-03-03
200 OK2017-02-28
200 OK2017-02-24
200 OK2017-02-21
200 OK2017-02-17
200 OK2017-02-14
200 OK2017-02-10
200 OK2017-02-07
200 OK2017-02-03
-1 Failed2017-01-31
-1 Failed2017-01-27
-1 Failed2017-01-24
-1 Failed2017-01-20
-1 Failed2017-01-17
-1 Failed2017-01-13
200 OK2017-01-10
200 OK2017-01-06
200 OK2017-01-03
200 OK2016-12-30
200 OK2016-12-27
200 OK2016-12-23
200 OK2016-12-20
200 OK2016-12-16
200 OK2016-12-13
200 OK2016-12-09
200 OK2016-12-06
200 OK2016-12-02
200 OK2016-11-29
200 OK2016-11-25
200 OK2016-11-22
200 OK2016-11-18
200 OK2016-11-15
200 OK2016-11-11
200 OK2016-11-08
200 OK2016-11-04
200 OK2016-11-01
200 OK2016-10-28
200 OK2016-10-25
200 OK2016-10-21
200 OK2016-10-18
200 OK2016-10-14
200 OK2016-10-11
200 OK2016-10-07
200 OK2016-10-04
200 OK2016-09-30
200 OK2016-09-27
200 OK2016-09-23
200 OK2016-09-20
200 OK2016-09-16
200 OK2016-09-13
200 OK2016-09-09
200 OK2016-09-06
200 OK2016-09-02
200 OK2016-08-30
200 OK2016-08-26
200 OK2016-08-23
200 OK2016-08-19
200 OK2016-08-16
200 OK2016-08-12
200 OK2016-08-09
200 OK2016-08-05
200 OK2016-08-02
200 OK2016-07-29
200 OK2016-07-26
200 OK2016-07-22
200 OK2016-07-19
200 OK2016-07-15
200 OK2016-07-12
200 OK2016-07-08
200 OK2016-07-05
200 OK2016-07-01
200 OK2016-06-28
200 OK2016-06-24
200 OK2016-06-21
200 OK2016-06-17
200 OK2016-06-14
200 OK2016-06-10
200 OK2016-06-07
200 OK2016-06-03
200 OK2016-05-31
200 OK2016-05-27
200 OK2016-05-24
200 OK2016-05-20
200 OK2016-05-17
200 OK2016-05-13
200 OK2016-05-10
200 OK2016-05-06
200 OK2016-05-03
200 OK2016-04-29
200 OK2016-04-26
200 OK2016-04-22
200 OK2016-04-19
200 OK2016-04-15
200 OK2016-04-12
200 OK2016-04-08
200 OK2016-04-05
200 OK2016-04-01
200 OK2016-03-29
-1 Failed2016-03-28
200 OK2016-03-25
200 OK2016-03-23
200 OK2016-03-21
200 OK2016-03-18
200 OK2016-03-16
200 OK2016-03-14
200 OK2016-03-11
200 OK2016-03-09
200 OK2016-03-07
200 OK2016-03-04
200 OK2016-03-02
200 OK2016-02-29
200 OK2016-02-26
200 OK2016-02-24
200 OK2016-02-22
200 OK2016-02-19
200 OK2016-02-17
200 OK2016-02-15
200 OK2016-02-14
200 OK2016-02-12
200 OK2016-02-10
200 OK2016-02-08
200 OK2016-02-07
200 OK2016-02-05
200 OK2016-02-03
200 OK2016-02-01
200 OK2016-01-31
200 OK2016-01-29
200 OK2016-01-27
200 OK2016-01-25
200 OK2016-01-24
200 OK2016-01-22
200 OK2016-01-20
200 OK2016-01-18
200 OK2016-01-17
200 OK2016-01-15
200 OK2016-01-13
200 OK2016-01-11
200 OK2016-01-10
200 OK2016-01-08
200 OK2016-01-06
200 OK2016-01-04

Tags

DNA
Aspergillus fumigatus Aspergillus nidulans
genome

Record metadata

  • Created on: 2015-06-20
  • Curated by:
    • Mengwei Li [2016-03-31]
    • Mengwei Li [2016-03-29]
    • Mengwei Li [2015-11-29]
    • Mengwei Li [2015-06-27]
Stats