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Database Commons - Viral Genomes

Viral Genomes

Citations: 0

z-index 0.00

Short name Viral Genomes
Full name Viral Genomes
Description Viral Genomes provides viral and viroid genome sequence data and related information.
URL http://www.ncbi.nlm.nih.gov/genome/viruses/
Year founded 2014
Last update & version 2014-11-26    v1.0
Availability Free to all users
University/Institution hosted National Center for Biotechnology Information
Address Bethesda,MD 20894,USA
City Bethesda
Province/State MD
Country/Region United States
Contact name J. Rodney Brister
Contact email jamesbr@ncbi.nlm.nih.gov
Data type(s)
Major organism(s)
Keyword(s)
  • viral and viroid genome
Publication(s)
  • NCBI viral genomes resource. [PMID: 25428358]

    J Rodney Brister, Danso Ako-Adjei, Yiming Bao, Olga Blinkova
    Nucleic acids research 2015:43(Database issue)
    Citation (to be updated)

    Abstract: Recent technological innovations have ignited an explosion in virus genome sequencing that promises to fundamentally alter our understanding of viral biology and profoundly impact public health policy. Yet, any potential benefits from the billowing cloud of next generation sequence data hinge upon well implemented reference resources that facilitate the identification of sequences, aid in the assembly of sequence reads and provide reference annotation sources. The NCBI Viral Genomes Resource is a reference resource designed to bring order to this sequence shockwave and improve usability of viral sequence data. The resource can be accessed at http://www.ncbi.nlm.nih.gov/genome/viruses/ and catalogs all publicly available virus genome sequences and curates reference genome sequences. As the number of genome sequences has grown, so too have the difficulties in annotating and maintaining reference sequences. The rapid expansion of the viral sequence universe has forced a recalibration of the data model to better provide extant sequence representation and enhanced reference sequence products to serve the needs of the various viral communities. This, in turn, has placed increased emphasis on leveraging the knowledge of individual scientific communities to identify important viral sequences and develop well annotated reference virus genome sets. Published by Oxford University Press on behalf of Nucleic Acids Research 2014. This work is written by US Government employees and is in the public domain in the US.

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Tags

DNA Protein RNA
Viroid Virus
viral and viroid genome

Record metadata

  • Created on: 2015-06-20
  • Curated by:
    • Lina Ma [2016-04-13]
    • Hongyan Yin [2016-03-31]
    • Mengwei Li [2016-02-15]
    • Mengwei Li [2016-02-13]
    • Jian Sang [2015-07-01]
    • Hongyan Yin [2015-06-26]
Stats